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Tags: documentation

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  1. Jupyter Notebooks on Hubs

    24 Jan 2019 | Contributor(s):: Martin Hunt

    These slides provide a quick introduction to running, creating, configuring, and publishing Jupyter Notebooks in the HUBzero environment. Use Python2, Python3, Octave, or R to create, run and share notebooks. The slides also introduce the Hublib Python library for creating tool UI elements.

  2. Publishing Jupyter Notebooks

    The proxied Jupyter tool is a useful place to develop code and analyses in a notebook style. VIDIA users can easily share their notebooks with other users by publishing notebooks as tools. A...

    https://vidia.ccr.buffalo.edu/kb/development/pubjnotebook

  3. R for Data Science

    28 Feb 2018 | Contributor(s):: Garrett Grolemund, Hadley Wickham

    This book will teach you how to do data science with R: You’ll learn how to get your data into R, get it into the most useful structure, transform it, visualise it and model it. In this book, you will find a practicum of skills for data science. Just as a chemist learns how to clean test tubes...

  4. R 3.4.3 release notes

    28 Feb 2018 |

    These release notes describe performance enhancements, bug fixes, and significant user-visible changes found in R version 3.4.3. VIDIA users can run this version of R in the deployed RStudio tool. R 3.4.3 (codename “Kite-Eating Tree”) was released in November 2017.

  5. Writing R functions for advanced data analysis

    28 Feb 2018 | | Contributor(s):: cshalizi

    This short paper was written to support an advanced data analysis course at Carnegie-Mellon University. It provides concrete examples and explains how to develop and debug R functions, understand scope, and take advantage of R's functional nature.

  6. Writing better R code

    28 Feb 2018 | | Contributor(s):: Laurent Gatto

    This short paper describes how to write functions, evaluate their performance, debug, test, and parallelize in R. Plenty of examples are provided; the intended audience can hack around in R but wants to improve their code performance, readability, and reusability.

  7. How to write and debug an R function

    28 Feb 2018 | | Contributor(s):: Slawa Rokicki

    This blog post introduces the why and how of writing functions in R, with a helpful focus on debugging.

  8. Using the HUBzero Workspace for code development

    03 Aug 2017 | | Contributor(s):: dsk, J M Sperhac

    This documentation describes the source code editors, copy and paste utilities, configurable Linux window manager, and one file transfer option offered in the VIDIA Workspace. It is intended to assist users as they get comfortable using the Workspace tool.

  9. R 3.4.0 release notes

    02 Aug 2017 |

    These release notes describe performance enhancements, bug fixes, and significant user-visible changes found in R version 3.4.0. VIDIA users can run this version of R in the deployed RStudio tool.R 3.4.0 (codename “You Stupid Darkness”) was released in April 2017.

  10. Running and Shutting Down a Jupyter Notebook

    02 Aug 2017 |

    This document is a brief introduction to executing (running) and shutting down Jupyter notebooks. A Jupyter Notebook is an application running inside the browser, consisting of computer code, visualizations, and descriptions of the analysis.This documentation is intended to help users of the...

  11. What is a Jupyter Notebook?

    02 Aug 2017 |

    This document is a brief introduction to Jupyter notebooks. A Jupyter Notebook is an application running inside the browser, consisting of computer code, visualizations, and descriptions of the analysis.This documentation is intended to help users of the Jupyter tool deployed on VIDIA.

  12. RapidMiner Fact Sheet

    17 Feb 2017 | | Contributor(s):: Rapid-I GmbH

    RapidMiner is an analytics workbench, written in Java, that provides a visual environment for machine learning, data and text mining, predictive analytics, and business analytics. An open source version of the software (v5) is available as a deployed tool to any registered user of the VIDIA...

  13. Using Submit

    Submit functionality enables qualified users to execute certain codes on the compute cluster. In order to use submit functionality, you must have access to the HUBzero Workspace and be a member of...

    https://vidia.ccr.buffalo.edu/kb/development/using-submit

  14. Plotting Systems in R

    07 Jun 2018 | | Contributor(s):: Dylan Childs

    The aim is to describe plotting systems in R, in particular the anatomy of ggplot2, and provide a quick introduction to ggplot2.

  15. Natural Language Processing with Python

    03 Aug 2015 | | Contributor(s):: Steven Bird, Ewan Klein, Edward Loper

    Analyzing Text with the Natural Language Toolkit

  16. R-Reference Sheet

    29 May 2015 | | Contributor(s):: C. Ryan Mraz

    A reference sheet for the R language.

  17. Data Wrangling with R

    07 Jun 2018 | | Contributor(s):: dylan childs

    Introduces Data Frames in R, describes how to manipulate them using base functionality and add-on packages, and describes how to access data from other sources.

  18. Tutorial: ggplot2

    22 Feb 2020 | | Contributor(s):: Ramon Saccilotto

    Sample code for the illustration of ggplot2

  19. R Tutorial for Education

    28 May 2015 | | Contributor(s):: Jared Knowles

    Learn the beginnings of R and specific statistical techniques

  20. simpleR - Using R for Introductory Statistics

    28 May 2015 | | Contributor(s):: John Verzani

    An introduction to using the statistical software package R for an introductory statistics course.